1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 11 | 12 | 13 | 14 | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
_Input profile | GG | AT | AC | GT | CT | AC | AG | CC | AA | GG | AG | AC | CT | GG |
1._RUQ_1081 | GG | AT | AC | GT | CT | AC | AG | CC | AA | GG | AG | AC | CT | GG |
2._PA_137_[PER] | GG | AT | AC | GT | CT | AC | AG | CC | AA | GG | AG | AC | CT | GG |
3._PA_137_[PER] | GG | AT | AC | GT | CT | AC | AG | CC | AA | GG | AG | AC | CT | GG |
4._PA_137_[PER] | GG | AT | AC | GT | CT | AC | AG | CC | AA | GG | AG | AC | CT | GG |
5._RUQ_1081 | _ | _ | AC | GT | CT | AC | AG | CC | AA | _ | AG | AC | CT | GG |
6._RUQ_1081 | _ | _ | AC | _ | _ | _ | AG | _ | _ | _ | _ | AC | _ | _ |
7._RUQ_36 | _ | _ | AC | GT | - | AC | AG | - | AA | _ | AG | AC | CT | GG |
8._RUQ_36 | GG | AT | AC | GT | CT | AC | AG | CC | AA | GG | AG | AC | CT | GG |
9._RUQ_1081 | GG | AT | AC | GT | CT | AC | AG | CC | AA | GG | AG | AC | CT | GG |
10._PA_137_[PER] | GG | AT | AC | GT | CT | AA | AG | CC | AA | GG | AG | AC | CT | GG |
11._PA_137_[PER] | GG | AT | AC | GT | CT | AA | AG | CC | AA | GG | AG | AC | CT | GG |
12._PA_137_[PER] | GG | AT | AC | GT | CT | AA | AG | CC | AA | GG | AG | AC | CT | GG |
13._PA_137_[PER] | GG | AT | AC | GT | CT | AA | AG | CC | AA | GG | AG | AC | CT | GG |
14._PA_137_[PER] | GG | AT | AC | GT | CT | AA | AG | CC | AA | GG | AG | AC | CT | GG |
15._PA_137_[PER] | GG | AT | AC | GT | CT | AA | AG | CC | AA | GG | AG | AC | CT | GG |
16._PA_137_[PER] | GG | AT | AC | GT | CT | AA | AG | CC | AA | GG | AG | AC | CT | GG |
17._PA_137_[PER] | GG | AT | AC | GT | CT | AA | AG | CC | AA | GG | AG | AC | CT | GG |
18._PA_137_[PER] | GG | AT | AC | GT | CT | AA | AG | CC | AA | GG | AG | AC | CT | GG |
19._PA_137_[PER] | GG | AT | AC | GT | CT | AA | AG | CC | AA | GG | AG | AC | CT | GG |
20._RUQ_36 | GG | AT | AC | GT | CT | AC | AG | _ | AA | GG | AG | AC | CT | GG |
21._GC-05-009-1-09 | GG | AT | AC | GT | CT | AA | AG | CC | AA | GG | AG | AC | CT | GG |
22._GC-05-009-1-09 | GG | AT | AC | GT | CT | AA | AG | CC | AA | GG | AG | AC | CT | GG |
23._GC-05-009-1-09 | GG | AT | AC | GT | CT | AA | AG | CC | AA | GG | AG | AC | CT | GG |
24._GC-05-009-1-09 | GG | AT | AC | GT | CT | AA | AG | CC | AA | GG | AG | AC | CT | GG |
25._GC-05-009-1-09 | GG | AT | AC | GT | CT | AA | AG | CC | AA | GG | AG | AC | CT | GG |
26._GC-05-117-3-19 | GG | AT | AC | GT | CT | AA | AG | CC | AA | GG | AG | AC | CT | GG |
27._GC-05-117-3-19 | GG | AT | AC | GT | CT | AA | AG | CC | AA | GG | AG | AC | CT | GG |
28._GC-05-117-3-19 | GG | AT | AC | GT | CT | AA | AG | CC | AA | GG | AG | AC | CT | GG |
29._GC-05-117-3-19 | GG | AT | AC | GT | CT | AA | AG | CC | AA | GG | AG | AC | CT | GG |
30._GC-05-117-3-19 | GG | AT | AC | GT | CT | AA | AG | CC | AA | GG | AG | AC | CT | GG |
31._PA137[PER] | _ | _ | AC | _ | CT | AC | AG | _ | AA | _ | _ | _ | _ | _ |
32._RUQ_36 | GG | AT | AC | AC | AG | AC | AG | GG | AA | GG | _ | AC | _ | CC |
33._MITC-000400 | GG | AT | AC | AC | AG | AC | AG | GG | AA | GG | _ | AC | _ | CC |
34._PA_137_[PER]_Fld#_201_Plt#_2 | GG | AT | AC | AC | AG | AC | AG | GG | AA | GG | _ | AC | _ | CC |
15 | 16 | 17 | 18 | 19 | 20 | 21 | 22 | 23 | 24 | 25 | 26 | 27 | 28 | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
_Input profile | CG | CC | TT | AA | TT | GG | CC | CC | CT | CG | AA | CT | AG | CC |
1._RUQ_1081 | CG | CC | TT | AA | _ | GG | _ | CC | CT | CG | AA | CT | AG | CC |
2._PA_137_[PER] | CG | CC | TT | AA | _ | GG | _ | CC | CT | CG | AA | CT | AG | CC |
3._PA_137_[PER] | CG | CC | TT | AA | _ | GG | _ | CC | CT | CG | AA | CT | AG | CC |
4._PA_137_[PER] | CG | CC | TT | AA | _ | GG | _ | CC | CT | CG | AA | CT | AG | CC |
5._RUQ_1081 | CG | CC | TT | _ | _ | GG | CC | CC | _ | _ | _ | _ | AG | CC |
6._RUQ_1081 | CG | CC | _ | AA | TT | GG | _ | _ | _ | _ | _ | _ | AG | _ |
7._RUQ_36 | CG | - | - | _ | _ | - | - | CC | _ | _ | _ | _ | AG | - |
8._RUQ_36 | CG | CC | CT | AA | _ | GG | _ | CC | CT | CG | AA | CT | AG | CC |
9._RUQ_1081 | CG | CC | CT | AA | _ | GG | _ | CC | CT | CG | AA | CT | AG | CC |
10._PA_137_[PER] | CG | CC | TT | AG | _ | GG | _ | CC | CT | CG | AA | CT | AG | CC |
11._PA_137_[PER] | CG | CC | TT | AG | _ | GG | _ | CC | CT | CG | AA | CT | AG | CC |
12._PA_137_[PER] | CG | CC | TT | AG | _ | GG | _ | CC | CT | CG | AA | CT | AG | CC |
13._PA_137_[PER] | CG | CC | TT | AG | _ | GG | _ | CC | CT | CG | AA | CT | AG | CC |
14._PA_137_[PER] | CG | CC | TT | AG | _ | GG | _ | CC | CT | CG | AA | CT | AG | CC |
15._PA_137_[PER] | CG | CC | TT | AG | _ | GG | _ | CC | CT | CG | AA | CT | AG | CC |
16._PA_137_[PER] | CG | CC | TT | AG | _ | GG | _ | CC | CT | CG | AA | CT | AG | CC |
17._PA_137_[PER] | CG | CC | TT | AG | _ | GG | _ | CC | CT | CG | AA | CT | AG | CC |
18._PA_137_[PER] | CG | CC | TT | AG | _ | GG | _ | CC | CT | CG | AA | CT | AG | CC |
19._PA_137_[PER] | CG | CC | TT | AG | _ | GG | _ | CC | CT | CG | AA | CT | AG | CC |
20._RUQ_36 | CG | _ | TT | AA | _ | _ | _ | CC | CT | CG | AA | CT | AG | _ |
21._GC-05-009-1-09 | CG | CC | TT | AG | CG | GG | CC | CC | CT | CG | AA | CT | AG | CC |
22._GC-05-009-1-09 | CG | CC | TT | AG | CG | GG | CC | CC | CT | CG | AA | CT | AG | CC |
23._GC-05-009-1-09 | CG | CC | TT | AG | CG | GG | CC | CC | CT | CG | AA | CT | AG | CC |
24._GC-05-009-1-09 | CG | CC | TT | AG | CG | GG | CC | CC | CT | CG | AA | CT | AG | CC |
25._GC-05-009-1-09 | CG | CC | TT | AG | CG | GG | CC | CC | CT | CG | AA | CT | AG | CC |
26._GC-05-117-3-19 | CG | CC | TT | AG | CG | GG | CC | CC | CT | CG | AA | CT | AG | CC |
27._GC-05-117-3-19 | CG | CC | TT | AG | CG | GG | CC | CC | CT | CG | AA | CT | AG | CC |
28._GC-05-117-3-19 | CG | CC | TT | AG | CG | GG | CC | CC | CT | CG | AA | CT | AG | CC |
29._GC-05-117-3-19 | CG | CC | TT | AG | CG | GG | CC | CC | CT | CG | AA | CT | AG | CC |
30._GC-05-117-3-19 | CG | CC | TT | AG | CG | GG | CC | CC | CT | CG | AA | CT | AG | CC |
31._PA137[PER] | CG | CC | _ | _ | _ | CC | GG | CC | _ | _ | _ | CT | _ | CC |
32._RUQ_36 | CG | CC | AA | _ | CG | CC | _ | GG | AG | CG | AA | AG | AG | GG |
33._MITC-000400 | CG | CC | AA | _ | CG | CC | _ | GG | AG | CG | AA | AG | AG | GG |
34._PA_137_[PER]_Fld#_201_Plt#_2 | CG | CC | AA | _ | CG | CC | _ | GG | AG | CG | AA | AG | AG | GG |
29 | 30 | 31 | 32 | 33 | 34 | 35 | 36 | 37 | 38 | 39 | 40 | |||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
_Input profile | GG | AA | CC | CC | TT | CT | AC | TT | CT | CC | GG | CC | X_X | X_X |
1._RUQ_1081 | GG | AA | CC | CC | TT | CT | AC | TT | CT | CC | GG | CC | X_X | X_X |
2._PA_137_[PER] | GG | AA | CC | CC | TT | CT | AC | TT | CT | CC | GG | CC | X_X | X_X |
3._PA_137_[PER] | GG | AA | _ | CC | TT | CT | AC | TT | CT | CC | GG | CC | X_X | X_X |
4._PA_137_[PER] | GG | AA | _ | CC | TT | CT | AC | TT | CT | CC | GG | CC | X_X | X_X |
5._RUQ_1081 | _ | _ | _ | _ | TT | _ | _ | _ | CT | CC | GG | _ | X_X | X_X |
6._RUQ_1081 | GG | _ | CC | _ | TT | _ | _ | _ | _ | CC | _ | _ | X_X | X_X |
7._RUQ_36 | _ | _ | _ | _ | - | _ | _ | _ | CT | - | - | _ | X_X | X_X |
8._RUQ_36 | GG | AA | CC | CC | TT | CT | AC | TT | CT | CC | GG | CC | X_X | X_X |
9._RUQ_1081 | GG | AA | CC | CC | TT | CT | AC | TT | CT | CC | GG | CC | X_X | X_X |
10._PA_137_[PER] | GG | AA | CC | CC | TT | CT | AC | TT | CT | CC | GG | CC | X_X | X_X |
11._PA_137_[PER] | GG | AA | CC | CC | TT | CT | AC | TT | CT | CC | GG | CC | X_X | X_X |
12._PA_137_[PER] | GG | AA | CC | CC | TT | CT | AC | TT | CT | CC | GG | CC | X_X | X_X |
13._PA_137_[PER] | GG | AA | CC | CC | TT | CT | AC | TT | CT | CC | GG | CC | X_X | X_X |
14._PA_137_[PER] | GG | AA | CC | CC | TT | CT | AC | TT | CT | CC | GG | CC | X_X | X_X |
15._PA_137_[PER] | GG | AA | CC | CC | TT | CT | AC | TT | CT | CC | GG | CC | X_X | X_X |
16._PA_137_[PER] | GG | AA | CC | CC | TT | CT | AC | TT | CT | CC | GG | CC | X_X | X_X |
17._PA_137_[PER] | GG | AA | CC | CC | TT | CT | AC | TT | CT | CC | GG | CC | X_X | X_X |
18._PA_137_[PER] | GG | AA | CC | CC | TT | CT | AC | TT | CT | CC | GG | CC | X_X | X_X |
19._PA_137_[PER] | GG | AA | CC | CC | TT | CT | AC | TT | CT | CC | GG | CC | X_X | X_X |
20._RUQ_36 | GG | AA | _ | CC | GT | CT | AC | TT | CT | CG | AG | CC | X_X | X_X |
21._GC-05-009-1-09 | GG | AA | CC | CC | TT | CT | AC | TT | CT | CC | GG | CC | X_X | X_X |
22._GC-05-009-1-09 | GG | AA | CC | CC | TT | CT | AC | TT | CT | CC | GG | CC | X_X | X_X |
23._GC-05-009-1-09 | GG | AA | CC | CC | TT | CT | AC | TT | CT | CC | GG | CC | X_X | X_X |
24._GC-05-009-1-09 | GG | AA | CC | CC | TT | CT | AC | TT | CT | CC | GG | CC | X_X | X_X |
25._GC-05-009-1-09 | GG | AA | CC | CC | TT | CT | AC | TT | CT | CC | GG | CC | X_X | X_X |
26._GC-05-117-3-19 | GG | AA | CC | CC | TT | CT | AC | TT | CT | CC | GG | CC | X_X | X_X |
27._GC-05-117-3-19 | GG | AA | CC | CC | TT | CT | AC | TT | CT | CC | GG | CC | X_X | X_X |
28._GC-05-117-3-19 | GG | AA | CC | CC | TT | CT | AC | TT | CT | CC | GG | CC | X_X | X_X |
29._GC-05-117-3-19 | GG | AA | CC | CC | TT | CT | AC | TT | CT | CC | GG | CC | X_X | X_X |
30._GC-05-117-3-19 | GG | AA | CC | CC | TT | CT | AC | TT | CT | CC | GG | CC | X_X | X_X |
31._PA137[PER] | _ | _ | _ | _ | _ | _ | _ | _ | _ | GG | _ | _ | X_X | X_X |
32._RUQ_36 | GG | AA | _ | _ | AA | AG | AC | AA | AG | GG | GG | GG | X_X | X_X |
33._MITC-000400 | GG | AA | _ | _ | AA | AG | AC | AA | AG | GG | GG | GG | X_X | X_X |
34._PA_137_[PER]_Fld#_201_Plt#_2 | GG | AA | _ | _ | AA | AG | AC | AA | AG | GG | GG | GG | X_X | X_X |
1 | TcSNP25 | 2 | TcSNP32 | 3 | TcSNP144 | 4 | TcSNP150 | 5 | TcSNP151 |
6 | TcSNP193 | 7 | TcSNP230 | 8 | TcSNP242 | 9 | TcSNP372 | 10 | TcSNP429 |
11 | TcSNP469 | 12 | TcSNP529 | 13 | TcSNP534 | 14 | TcSNP560 | 15 | TcSNP577 |
16 | TcSNP591 | 17 | TcSNP619 | 18 | TcSNP645 | 19 | TcSNP836 | 20 | TcSNP872 |
21 | TcSNP878 | 22 | TcSNP891 | 23 | TcSNP917 | 24 | TcSNP929 | 25 | TcSNP953 |
26 | TcSNP994 | 27 | TcSNP998 | 28 | TcSNP1060 | 29 | TcSNP1062 | 30 | TcSNP1075 |
31 | TcSNP1144 | 32 | TcSNP1165 | 33 | TcSNP1253 | 34 | TcSNP1270 | 35 | TcSNP1350 |
36 | TcSNP1414 | 37 | TcSNP1442 | 38 | TcSNP1458 | 39 | TcSNP1484 | 40 | TcSNP1520 |